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Gprc6a G protein-coupled receptor, family C, group 6, member A [ Mus musculus (house mouse) ]

Gene ID: 210198, updated on 2-Nov-2024

Summary

Official Symbol
Gprc6aprovided by MGI
Official Full Name
G protein-coupled receptor, family C, group 6, member Aprovided by MGI
Primary source
MGI:MGI:2429498
See related
Ensembl:ENSMUSG00000019905 AllianceGenome:MGI:2429498
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables G protein-coupled receptor activity. Involved in regulation of testosterone biosynthetic process and response to amino acid. Is active in plasma membrane. Is expressed in several structures, including femur; liver; male reproductive gland or organ; musculature; and spleen. Orthologous to human GPRC6A (G protein-coupled receptor class C group 6 member A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Gprc6a in Genome Data Viewer
Location:
10 B3; 10 25.66 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (51490919..51507554, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (51614823..51631458, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46224 Neighboring gene family with sequence similarity 162, member B Neighboring gene STARR-seq mESC enhancer starr_26663 Neighboring gene regulatory factor X, 6 Neighboring gene Sumo1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (9)  1 citation

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC124360

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables G protein-coupled receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
G-protein coupled receptor family C group 6 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153071.1NP_694711.1  G-protein coupled receptor family C group 6 member A precursor

    See identical proteins and their annotated locations for NP_694711.1

    Status: PROVISIONAL

    Source sequence(s)
    AY101365
    Consensus CDS
    CCDS23834.1
    UniProtKB/Swiss-Prot
    Q5DK51, Q5DK52, Q8K4Z6
    Related
    ENSMUSP00000020062.4, ENSMUST00000020062.4
    Conserved Domains (4) summary
    cd06361
    Location:37506
    PBP1_GPC6A_like; Ligand-binding domain of the promiscuous L-alpha-amino acid receptor GPRC6A which is a broad-spectrum amino acid-sensing receptor
    pfam00003
    Location:605838
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam01094
    Location:75482
    ANF_receptor; Receptor family ligand binding region
    pfam07562
    Location:520571
    NCD3G; Nine Cysteines Domain of family 3 GPCR

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    51490919..51507554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)