U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ccdc73 coiled-coil domain containing 73 [ Mus musculus (house mouse) ]

Gene ID: 211936, updated on 2-Nov-2024

Summary

Official Symbol
Ccdc73provided by MGI
Official Full Name
coiled-coil domain containing 73provided by MGI
Primary source
MGI:MGI:3606488
See related
Ensembl:ENSMUSG00000045106 AllianceGenome:MGI:3606488
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4931417A20; 2210415I11Rik
Summary
Orthologous to human CCDC73 (coiled-coil domain containing 73). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in CNS E18 (RPKM 2.4), frontal lobe adult (RPKM 1.9) and 15 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Ccdc73 in Genome Data Viewer
Location:
2 E2; 2 55.0 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (104716669..104830082)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (104886324..104999737)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene TAR DNA binding protein pseudogene Neighboring gene proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) Neighboring gene STARR-positive B cell enhancer ABC_E7844 Neighboring gene STARR-seq mESC enhancer starr_05298 Neighboring gene STARR-positive B cell enhancer mm9_chr2:104728128-104728428 Neighboring gene STARR-positive B cell enhancer mm9_chr2:104828551-104828851 Neighboring gene eukaryotic translation initiation factor 3, subunit M Neighboring gene predicted gene, 38521 Neighboring gene NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 73

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177600.4NP_808268.2  coiled-coil domain-containing protein 73

    See identical proteins and their annotated locations for NP_808268.2

    Status: VALIDATED

    Source sequence(s)
    AK029862, AL606494, BB615231, BC095976
    Consensus CDS
    CCDS16494.2
    UniProtKB/Swiss-Prot
    A2A6Z9, Q501M4, Q8CDM4
    Related
    ENSMUSP00000106743.2, ENSMUST00000111114.8
    Conserved Domains (1) summary
    pfam15818
    Location:281059
    CCDC73; Coiled-coil domain-containing protein 73 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    104716669..104830082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)