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Trp53i13 transformation related protein 53 inducible protein 13 [ Mus musculus (house mouse) ]

Gene ID: 216964, updated on 2-Nov-2024

Summary

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Official Symbol
Trp53i13provided by MGI
Official Full Name
transformation related protein 53 inducible protein 13provided by MGI
Primary source
MGI:MGI:1915125
See related
Ensembl:ENSMUSG00000044328 AllianceGenome:MGI:1915125
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tp53i13; 2410019G02Rik
Summary
Predicted to be involved in negative regulation of cell cycle. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm. Orthologous to human TP53I13 (tumor protein p53 inducible protein 13). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in thymus adult (RPKM 21.4), limb E14.5 (RPKM 18.7) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Trp53i13 in Genome Data Viewer
Location:
11 B5; 11 46.62 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (77398925..77404214, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (77508099..77515921, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 13b Neighboring gene STARR-seq mESC enhancer starr_30056 Neighboring gene GIT ArfGAP 1 Neighboring gene predicted gene 10392 Neighboring gene abhydrolase domain containing 15 Neighboring gene TAO kinase 1 Neighboring gene eukaryotic translation initiation factor 2, subunit 1 alpha pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article
  2. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in negative regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of cell cycle ISO
Inferred from Sequence Orthology
more info
  
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
  
involved_in response to organic cyclic compound IEA
Inferred from Electronic Annotation
more info
  
involved_in response to xenobiotic stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
tumor protein p53-inducible protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024920.1 → NP_001020091.1  tumor protein p53-inducible protein 13 precursor

    See identical proteins and their annotated locations for NP_001020091.1

    Status: PROVISIONAL

    Source sequence(s)
    AL607072, AL645588, BQ939386
    Consensus CDS
    CCDS25081.1
    UniProtKB/Swiss-Prot
    Q5F267
    UniProtKB/TrEMBL
    B2RVS3
    Related
    ENSMUSP00000057592.5, ENSMUST00000060417.11

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    77398925..77404214 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006532952.2 → XP_006533015.1  tumor protein p53-inducible protein 13 isoform X3

  2. XM_030245836.1 → XP_030101696.1  tumor protein p53-inducible protein 13 isoform X4

  3. XM_017314463.1 → XP_017169952.1  tumor protein p53-inducible protein 13 isoform X4

  4. XM_030245834.1 → XP_030101694.1  tumor protein p53-inducible protein 13 isoform X4

  5. XM_006532951.2 → XP_006533014.1  tumor protein p53-inducible protein 13 isoform X2

  6. XM_006532950.2 → XP_006533013.1  tumor protein p53-inducible protein 13 isoform X1

    See identical proteins and their annotated locations for XP_006533013.1

RNA

  1. XR_003949389.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5F267.1 GenPept UniProtKB/Swiss-Prot:Q5F267

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