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Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [ Mus musculus (house mouse) ]

Gene ID: 21846, updated on 28-Oct-2024

Summary

Official Symbol
Tie1provided by MGI
Official Full Name
tyrosine kinase with immunoglobulin-like and EGF-like domains 1provided by MGI
Primary source
MGI:MGI:99906
See related
Ensembl:ENSMUSG00000033191 AllianceGenome:MGI:99906
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TIE; tie-1; D430008P04Rik
Summary
Predicted to enable transmembrane receptor protein tyrosine kinase activity. Involved in circulatory system development; response to retinoic acid; and tissue remodeling. Acts upstream of or within several processes, including negative regulation of angiogenesis; plasma membrane fusion; and vasculature development. Located in plasma membrane. Is expressed in several structures, including cardiovascular system; central nervous system; extraembryonic component; genitourinary system; and immune system. Human ortholog(s) of this gene implicated in hereditary lymphedema. Orthologous to human TIE1 (tyrosine kinase with immunoglobulin like and EGF like domains 1). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in lung adult (RPKM 126.3), adrenal adult (RPKM 37.3) and 14 other tissues See more
Orthologs
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Genomic context

See Tie1 in Genome Data Viewer
Location:
4 D2.1; 4 54.67 cM
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118328388..118347046, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118471191..118489849, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene ELOVL fatty acid elongase 1 Neighboring gene STARR-positive B cell enhancer ABC_E6202 Neighboring gene cell division cycle 20 Neighboring gene myeloproliferative leukemia virus oncogene Neighboring gene predicted gene 12859 Neighboring gene ribosomal protein S5 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane receptor protein tyrosine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transmembrane receptor protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in aortic valve morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within blood vessel development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in branching involved in lymph vessel morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within in utero embryonic development IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within lymphatic endothelial cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organism development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within negative regulation of angiogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within negative regulation of cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within plasma membrane fusion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of angiogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of endothelial cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of regulation of extracellular matrix assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to retinoic acid IDA
Inferred from Direct Assay
more info
PubMed 
involved_in tissue remodeling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vasculogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in membrane ISM
Inferred from Sequence Model
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
tyrosine-protein kinase receptor Tie-1
Names
tyrosine kinase receptor 1
NP_035717.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011587.2NP_035717.2  tyrosine-protein kinase receptor Tie-1 precursor

    See identical proteins and their annotated locations for NP_035717.2

    Status: VALIDATED

    Source sequence(s)
    AK052192, AK052413, BB841681, CR518034
    Consensus CDS
    CCDS18553.1
    UniProtKB/Swiss-Prot
    Q06806, Q811F4, Q8BGI2
    Related
    ENSMUSP00000037129.6, ENSMUST00000047421.6
    Conserved Domains (9) summary
    smart00219
    Location:8351103
    TyrKc; Tyrosine kinase, catalytic domain
    smart00409
    Location:367441
    IG; Immunoglobulin
    smart00410
    Location:131210
    IG_like; Immunoglobulin like
    cd00054
    Location:312343
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:225263
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00063
    Location:640732
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd05089
    Location:8321128
    PTKc_Tie1; Catalytic domain of the Protein Tyrosine Kinase, Tie1
    pfam00041
    Location:546628
    fn3; Fibronectin type III domain
    pfam00047
    Location:127208
    ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    118328388..118347046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)