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4930474N05Rik RIKEN cDNA 4930474N05 gene [ Mus musculus (house mouse) ]

Gene ID: 218921, updated on 2-Nov-2024

Summary

Official Symbol
4930474N05Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930474N05 geneprovided by MGI
Primary source
MGI:MGI:3586330
See related
Ensembl:ENSMUSG00000096405 AllianceGenome:MGI:3586330
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Acts upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 6.4) See more
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Genomic context

See 4930474N05Rik in Genome Data Viewer
Location:
14 B; 14 20.88 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (35816899..35819358)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (36094942..36097401)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 3F pseudogene Neighboring gene STARR-seq mESC enhancer starr_36412 Neighboring gene predicted gene 7853 Neighboring gene STARR-seq mESC enhancer starr_36413 Neighboring gene predicted gene, 24394 Neighboring gene SET translocation pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within hematopoietic progenitor cell differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC218921

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175008.3NP_778173.1  uncharacterized protein LOC218921

    See identical proteins and their annotated locations for NP_778173.1

    Status: PREDICTED

    Source sequence(s)
    AC166822
    Consensus CDS
    CCDS49448.1
    UniProtKB/TrEMBL
    Q3V0R1, Q8BVR5
    Related
    ENSMUSP00000153709.2, ENSMUST00000226305.2
    Conserved Domains (1) summary
    cd06224
    Location:77189
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    35816899..35819358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006518825.2XP_006518888.1  uncharacterized protein LOC218921 isoform X1

    Conserved Domains (1) summary
    cd06224
    Location:77135
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...