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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286040.1 → NP_001272969.1 ankyrin repeat and SAM domain-containing protein 1A isoform 1
See identical proteins and their annotated locations for NP_001272969.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC126040, AC132460, AK147273
- Consensus CDS
-
CCDS70777.1
- UniProtKB/TrEMBL
-
Q3UHP6
- Related
- ENSMUSP00000025058.8, ENSMUST00000025058.15
- Conserved Domains (7) summary
-
- cd09499
Location:713 → 779
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:784 → 848
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:716 → 775
- SAM; Sterile alpha motif
- cd00204
Location:70 → 219
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd01274
Location:942 → 1087
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- pfam12796
Location:203 → 294
- Ank_2; Ankyrin repeats (3 copies)
- sd00045
Location:165 → 196
- ANK; ANK repeat [structural motif]
-
NM_001286041.1 → NP_001272970.1 ankyrin repeat and SAM domain-containing protein 1A isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon the 5' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC126040, AC132460
- Consensus CDS
-
CCDS70778.1
- UniProtKB/Swiss-Prot
-
P59672
- Related
- ENSMUSP00000085344.6, ENSMUST00000088027.7
- Conserved Domains (7) summary
-
- cd09499
Location:692 → 758
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:763 → 827
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:695 → 754
- SAM; Sterile alpha motif
- cd00204
Location:70 → 198
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd01274
Location:921 → 1066
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- pfam12796
Location:80 → 175
- Ank_2; Ankyrin repeats (3 copies)
- sd00045
Location:76 → 106
- ANK; ANK repeat [structural motif]
-
NM_001374802.1 → NP_001361731.1 ankyrin repeat and SAM domain-containing protein 1A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC126040, AC132460
- Consensus CDS
-
CCDS89037.1
- UniProtKB/TrEMBL
-
A0A3B2WAQ7
- Related
- ENSMUSP00000156466.2, ENSMUST00000233525.2
- Conserved Domains (5) summary
-
- cd09499
Location:692 → 758
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:763 → 827
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:66 → 280
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:921 → 1066
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:76 → 106
- ANK; ANK repeat [structural motif]
-
NM_001425247.1 → NP_001412176.1 ankyrin repeat and SAM domain-containing protein 1A isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC126040, AC132460
-
NM_181413.4 → NP_852078.1 ankyrin repeat and SAM domain-containing protein 1A isoform 3
See identical proteins and their annotated locations for NP_852078.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) use an alternate structure at the 3' end which results in a frameshift compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus compared to isoform 2.
- Source sequence(s)
-
AC126040, AC132460
- Consensus CDS
-
CCDS37525.1
- UniProtKB/Swiss-Prot
- P59672, Q6ZQG0
- Related
- ENSMUSP00000110491.2, ENSMUST00000114842.9
- Conserved Domains (7) summary
-
- cd09499
Location:713 → 779
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:784 → 848
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:716 → 775
- SAM; Sterile alpha motif
- cd00204
Location:70 → 219
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd01274
Location:942 → 1087
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- pfam12796
Location:203 → 294
- Ank_2; Ankyrin repeats (3 copies)
- sd00045
Location:165 → 196
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
28128273..28281753
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006524087.3 → XP_006524150.1 ankyrin repeat and SAM domain-containing protein 1A isoform X1
See identical proteins and their annotated locations for XP_006524150.1
- Conserved Domains (6) summary
-
- cd09499
Location:713 → 779
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:784 → 848
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:66 → 301
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:942 → 1087
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:165 → 196
- ANK; ANK repeat [structural motif]
- pfam12796
Location:203 → 294
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006524088.3 → XP_006524151.1 ankyrin repeat and SAM domain-containing protein 1A isoform X2
See identical proteins and their annotated locations for XP_006524151.1
- Conserved Domains (6) summary
-
- cd09499
Location:713 → 779
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:784 → 848
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:66 → 301
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:942 → 1087
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:165 → 196
- ANK; ANK repeat [structural motif]
- pfam12796
Location:203 → 294
- Ank_2; Ankyrin repeats (3 copies)
-
XM_030249683.2 → XP_030105543.1 ankyrin repeat and SAM domain-containing protein 1A isoform X3
- Conserved Domains (6) summary
-
- cd09499
Location:674 → 740
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:745 → 809
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:27 → 262
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:903 → 1048
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:126 → 157
- ANK; ANK repeat [structural motif]
- pfam12796
Location:164 → 255
- Ank_2; Ankyrin repeats (3 copies)
-
XM_030249682.1 → XP_030105542.1 ankyrin repeat and SAM domain-containing protein 1A isoform X3
- Conserved Domains (6) summary
-
- cd09499
Location:674 → 740
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:745 → 809
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:27 → 262
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:903 → 1048
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:126 → 157
- ANK; ANK repeat [structural motif]
- pfam12796
Location:164 → 255
- Ank_2; Ankyrin repeats (3 copies)
-
XM_030249685.1 → XP_030105545.1 ankyrin repeat and SAM domain-containing protein 1A isoform X5
- Conserved Domains (6) summary
-
- cd09499
Location:651 → 717
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:722 → 786
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:4 → 239
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:880 → 1025
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:103 → 134
- ANK; ANK repeat [structural motif]
- pfam12796
Location:141 → 232
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006524089.5 → XP_006524152.1 ankyrin repeat and SAM domain-containing protein 1A isoform X3
See identical proteins and their annotated locations for XP_006524152.1
- Conserved Domains (6) summary
-
- cd09499
Location:674 → 740
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:745 → 809
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- PHA03095
Location:27 → 262
- PHA03095; ankyrin-like protein; Provisional
- cd01274
Location:903 → 1048
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- sd00045
Location:126 → 157
- ANK; ANK repeat [structural motif]
- pfam12796
Location:164 → 255
- Ank_2; Ankyrin repeats (3 copies)
-
XM_030249686.2 → XP_030105546.1 ankyrin repeat and SAM domain-containing protein 1A isoform X8
- UniProtKB/TrEMBL
- A0A3B2W7H4, Q3TE53
- Conserved Domains (3) summary
-
- cd09499
Location:156 → 222
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:227 → 291
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:385 → 530
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
-
XM_036160515.1 → XP_036016408.1 ankyrin repeat and SAM domain-containing protein 1A isoform X6
- Conserved Domains (3) summary
-
- cd09499
Location:156 → 222
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:227 → 291
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:385 → 530
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
-
XM_036160516.1 → XP_036016409.1 ankyrin repeat and SAM domain-containing protein 1A isoform X7
- UniProtKB/TrEMBL
-
Q3TE53
- Conserved Domains (3) summary
-
- cd09499
Location:156 → 222
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:227 → 291
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:385 → 530
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
-
XM_006524091.4 → XP_006524154.1 ankyrin repeat and SAM domain-containing protein 1A isoform X8
See identical proteins and their annotated locations for XP_006524154.1
- UniProtKB/TrEMBL
- A0A3B2W7H4, Q3TE53
- Related
- ENSMUSP00000156518.2, ENSMUST00000139173.3
- Conserved Domains (3) summary
-
- cd09499
Location:156 → 222
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:227 → 291
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:385 → 530
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
-
XM_036160517.1 → XP_036016410.1 ankyrin repeat and SAM domain-containing protein 1A isoform X7
- UniProtKB/TrEMBL
-
Q3TE53
- Conserved Domains (3) summary
-
- cd09499
Location:156 → 222
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:227 → 291
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:385 → 530
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
-
XM_030249687.2 → XP_030105547.1 ankyrin repeat and SAM domain-containing protein 1A isoform X10
- UniProtKB/TrEMBL
-
A0A3B2W4H6
- Conserved Domains (3) summary
-
- cd09500
Location:36 → 100
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:194 → 339
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
- cl15755
Location:1 → 31
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_036160518.1 → XP_036016411.1 ankyrin repeat and SAM domain-containing protein 1A isoform X9
- UniProtKB/TrEMBL
-
A0A3B2W4H6
- Related
- ENSMUSP00000156946.2, ENSMUST00000232872.2
- Conserved Domains (3) summary
-
- cd09499
Location:17 → 83
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:88 → 152
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- cd01274
Location:246 → 391
- PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain