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Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [ Mus musculus (house mouse) ]

Gene ID: 22629, updated on 2-Nov-2024

Summary

Official Symbol
Ywhahprovided by MGI
Official Full Name
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptideprovided by MGI
Primary source
MGI:MGI:109194
See related
Ensembl:ENSMUSG00000018965 AllianceGenome:MGI:109194
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables actin binding activity; protein domain specific binding activity; and transmembrane transporter binding activity. Involved in presynaptic modulation of chemical synaptic transmission. Acts upstream of or within intracellular protein transport and negative regulation of dendrite morphogenesis. Located in cytoplasm. Is active in cerebellar granule cell to Purkinje cell synapse and presynapse. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human YWHAH (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in cerebellum adult (RPKM 399.9), cortex adult (RPKM 372.6) and 26 other tissues See more
Orthologs
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Genomic context

See Ywhah in Genome Data Viewer
Location:
5 B1; 5 17.42 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (33176160..33185310)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (33018816..33027966)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene proline rich 14-like Neighboring gene ribosomal protein L37 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10312 Neighboring gene DEP domain containing 5 Neighboring gene predicted gene, 24003 Neighboring gene STARR-seq mESC enhancer starr_12808 Neighboring gene STARR-seq mESC enhancer starr_12809 Neighboring gene STARR-seq mESC enhancer starr_12810 Neighboring gene predicted gene, 57845 Neighboring gene STARR-seq mESC enhancer starr_12813 Neighboring gene predicted gene, 29892 Neighboring gene predicted gene, 40278

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Gene trapped (1) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables enzyme binding IEA
Inferred from Electronic Annotation
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables nuclear glucocorticoid receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables nuclear glucocorticoid receptor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein domain specific binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables sodium channel regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables sodium channel regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables transmembrane transporter binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transmembrane transporter binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in cytoskeleton organization NAS
Non-traceable Author Statement
more info
PubMed 
involved_in glucocorticoid catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in glucocorticoid catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within intracellular protein transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in membrane depolarization during action potential ISO
Inferred from Sequence Orthology
more info
 
involved_in membrane depolarization during action potential ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in negative regulation of apoptotic process NAS
Non-traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within negative regulation of dendrite morphogenesis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in nuclear receptor-mediated glucocorticoid signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in nuclear receptor-mediated glucocorticoid signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in presynaptic modulation of chemical synaptic transmission IDA
Inferred from Direct Assay
more info
PubMed 
involved_in presynaptic modulation of chemical synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein localization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of mitotic nuclear division NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of sodium ion transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of sodium ion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in regulation of sodium ion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of sodium ion transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cerebellar granule cell to Purkinje cell synapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cerebellar granule cell to Purkinje cell synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in intercalated disc IC
Inferred by Curator
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in presynapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in synapse ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
14-3-3 protein eta
Names
14-3-3 eta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011738.2NP_035868.1  14-3-3 protein eta

    See identical proteins and their annotated locations for NP_035868.1

    Status: VALIDATED

    Source sequence(s)
    AK149224, CB183421, CD770463
    Consensus CDS
    CCDS19198.1
    UniProtKB/Swiss-Prot
    P68510, Q3TGZ9
    Related
    ENSMUSP00000019109.8, ENSMUST00000019109.8
    Conserved Domains (1) summary
    cd10025
    Location:3241
    14-3-3_eta; 14-3-3 eta, an isoform of 14-3-3 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    33176160..33185310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)