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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001290625.1 → NP_001277554.1 target of rapamycin complex 2 subunit MAPKAP1 isoform a
See identical proteins and their annotated locations for NP_001277554.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 4 all encode the same isoform (a).
- Source sequence(s)
-
AK132263, AL808102, AL845262, BC090644
- Consensus CDS
-
CCDS15948.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Related
- ENSMUSP00000108751.2, ENSMUST00000113126.3
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
NM_001290626.1 → NP_001277555.1 target of rapamycin complex 2 subunit MAPKAP1 isoform b
See identical proteins and their annotated locations for NP_001277555.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon and it thus differs in its 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream in-frame start codon compared to variant 1. The encoded isoform (b) is shorter at the N-terminus compared to isoform a. Variants 3 and 5 both encode the same isoform (b).
- Source sequence(s)
-
AK042154, AL845262, BB852269, BC090644
- Consensus CDS
-
CCDS71035.1
- UniProtKB/TrEMBL
-
A2AR15
- Related
- ENSMUSP00000123301.2, ENSMUST00000124443.8
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
NM_001362919.1 → NP_001349848.1 target of rapamycin complex 2 subunit MAPKAP1 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 4 all encode the same isoform (a).
- Source sequence(s)
-
AL808102, AL845262
- Consensus CDS
-
CCDS15948.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
NM_001362920.1 → NP_001349849.1 target of rapamycin complex 2 subunit MAPKAP1 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence and initiates translation at a downstream in-frame start codon compared to variant 1. The encoded isoform (b) is shorter at the N-terminus compared to isoform a. Variants 3 and 5 both encode the same isoform (b).
- Source sequence(s)
-
AL808102, AL845262
- Consensus CDS
-
CCDS71035.1
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
NM_001362921.1 → NP_001349850.1 target of rapamycin complex 2 subunit MAPKAP1 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AL808102, AL845262
- Consensus CDS
-
CCDS89477.1
- Related
- ENSMUSP00000108749.2, ENSMUST00000113124.8
- Conserved Domains (3) summary
-
- cd13331
Location:347 → 454
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
NM_177345.4 → NP_796319.1 target of rapamycin complex 2 subunit MAPKAP1 isoform a
See identical proteins and their annotated locations for NP_796319.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1, 2, and 4 all encode the same isoform (a).
- Source sequence(s)
-
AK042154, AK052045, AL845262, BB852269, BC090644
- Consensus CDS
-
CCDS15948.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Related
- ENSMUSP00000116494.2, ENSMUST00000147337.8
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
34296783..34514970
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030249984.2 → XP_030105844.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_036160892.1 → XP_036016785.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_036160886.1 → XP_036016779.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X3
- Conserved Domains (3) summary
-
- cd13331
Location:324 → 431
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_011239084.4 → XP_011237386.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X1
See identical proteins and their annotated locations for XP_011237386.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249994.2 → XP_030105854.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X3
- Conserved Domains (3) summary
-
- cd13331
Location:324 → 431
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_036160887.1 → XP_036016780.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X4
- Conserved Domains (3) summary
-
- cd13331
Location:288 → 395
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249997.2 → XP_030105857.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250001.1 → XP_030105861.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250011.2 → XP_030105871.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X7
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:132 → 239
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 32
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250003.2 → XP_030105863.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X6
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:155 → 262
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249979.2 → XP_030105839.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249999.2 → XP_030105859.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_036160899.1 → XP_036016792.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249998.1 → XP_030105858.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_006497983.3 → XP_006498046.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X5
See identical proteins and their annotated locations for XP_006498046.1
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:191 → 298
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249991.2 → XP_030105851.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X3
- Conserved Domains (3) summary
-
- cd13331
Location:324 → 431
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_006497978.5 → XP_006498041.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X2
- UniProtKB/Swiss-Prot
-
Q8BKH7
- Conserved Domains (3) summary
-
- cd13331
Location:347 → 454
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_006497980.5 → XP_006498043.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X3
- Conserved Domains (3) summary
-
- cd13331
Location:324 → 431
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030249995.2 → XP_030105855.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X4
- Conserved Domains (3) summary
-
- cd13331
Location:288 → 395
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 224
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250002.2 → XP_030105862.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X6
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:155 → 262
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_036160901.1 → XP_036016794.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X7
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:132 → 239
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 32
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_011239083.3 → XP_011237385.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X1
See identical proteins and their annotated locations for XP_011237385.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250012.2 → XP_030105872.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X7
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:132 → 239
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 32
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_030250004.2 → XP_030105864.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X6
- UniProtKB/TrEMBL
-
A2AR15
- Conserved Domains (2) summary
-
- cd13331
Location:155 → 262
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam16978
Location:1 → 74
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain
-
XM_006497975.2 → XP_006498038.1 target of rapamycin complex 2 subunit MAPKAP1 isoform X1
See identical proteins and their annotated locations for XP_006498038.1
- UniProtKB/Swiss-Prot
- A2AN72, A2AN74, A2AR13, A2AR16, Q80UY4, Q8BKH7, Q8BMV5, Q8R2N9
- Conserved Domains (3) summary
-
- cd13331
Location:383 → 490
- PH_Avo1; Avo1 Pleckstrin homology (PH) domain
- pfam05422
Location:18 → 129
- SIN1; Stress-activated map kinase interacting protein 1 (SIN1)
- pfam16978
Location:140 → 266
- CRIM; SAPK-interacting protein 1 (Sin1), middle CRIM domain