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Tmem69 transmembrane protein 69 [ Mus musculus (house mouse) ]

Gene ID: 230657, updated on 2-Nov-2024

Summary

Official Symbol
Tmem69provided by MGI
Official Full Name
transmembrane protein 69provided by MGI
Primary source
MGI:MGI:3045357
See related
Ensembl:ENSMUSG00000055900 AllianceGenome:MGI:3045357
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A630048M13Rik
Summary
Predicted to be located in membrane. Orthologous to human TMEM69 (transmembrane protein 69). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in liver E14 (RPKM 3.3), liver E14.5 (RPKM 3.1) and 28 other tissues See more
Orthologs
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Genomic context

See Tmem69 in Genome Data Viewer
Location:
4 D1; 4 53.22 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (116408725..116414262, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (116551528..116557116, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene microtubule associated serine/threonine kinase 2 Neighboring gene predicted gene, 52760 Neighboring gene STARR-seq mESC enhancer starr_11138 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:116180277-116180386 Neighboring gene IAP promoted placental gene Neighboring gene STARR-seq mESC enhancer starr_11140 Neighboring gene GC-rich promoter binding protein 1-like 1 Neighboring gene RIKEN cDNA C530005A16 gene Neighboring gene coiled-coil domain containing 17

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Clone Names

  • MGC118424

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177670.4NP_808338.2  transmembrane protein 69

    See identical proteins and their annotated locations for NP_808338.2

    Status: VALIDATED

    Source sequence(s)
    AL669953
    Consensus CDS
    CCDS51277.1
    UniProtKB/Swiss-Prot
    A2ACZ7, Q3KQJ0, Q8C9K2
    Related
    ENSMUSP00000065821.6, ENSMUST00000069674.6
    Conserved Domains (1) summary
    pfam11911
    Location:93228
    DUF3429; Protein of unknown function (DUF3429)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    116408725..116414262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503007.5XP_006503070.1  transmembrane protein 69 isoform X1

    See identical proteins and their annotated locations for XP_006503070.1

    UniProtKB/Swiss-Prot
    A2ACZ7, Q3KQJ0, Q8C9K2
    Conserved Domains (1) summary
    pfam11911
    Location:93228
    DUF3429; Protein of unknown function (DUF3429)