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5530400C23Rik RIKEN cDNA 5530400C23 gene [ Mus musculus (house mouse) ]

Gene ID: 232426, updated on 2-Nov-2024

Summary

Official Symbol
5530400C23Rikprovided by MGI
Official Full Name
RIKEN cDNA 5530400C23 geneprovided by MGI
Primary source
MGI:MGI:1918650
See related
Ensembl:ENSMUSG00000055594 AllianceGenome:MGI:1918650
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GRP
Summary
Predicted to enable hydroxyapatite binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See 5530400C23Rik in Genome Data Viewer
Location:
6 G1; 6 64.03 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (133269179..133272753)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (133292216..133295790)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11338 Neighboring gene small integral membrane protein 10 like 1 Neighboring gene STARR-seq mESC enhancer starr_17521 Neighboring gene calmodulin 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17522 Neighboring gene STARR-seq mESC enhancer starr_17523 Neighboring gene predicted gene, 34149 Neighboring gene STARR-seq mESC enhancer starr_17524 Neighboring gene STARR-seq mESC enhancer starr_17527 Neighboring gene STARR-seq mESC enhancer starr_17528 Neighboring gene predicted gene 5885

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hydroxyapatite binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC232426
Names
submandibular gland secretory Glx-rich protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027784.1NP_082060.1  uncharacterized protein LOC232426 precursor

    See identical proteins and their annotated locations for NP_082060.1

    Status: VALIDATED

    Source sequence(s)
    AC126261
    Consensus CDS
    CCDS51935.1
    UniProtKB/TrEMBL
    Q9D3I0
    Related
    ENSMUSP00000035635.7, ENSMUST00000048459.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    133269179..133272753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)