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4933402N03Rik RIKEN cDNA 4933402N03 gene [ Mus musculus (house mouse) ]

Gene ID: 233918, updated on 2-Nov-2024

Summary

Official Symbol
4933402N03Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933402N03 geneprovided by MGI
Primary source
MGI:MGI:1914681
See related
Ensembl:ENSMUSG00000013668 AllianceGenome:MGI:1914681
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930412O05
Summary
Orthologous to human C10orf120 (chromosome 10 open reading frame 120). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 11.0) See more
Orthologs
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Genomic context

See 4933402N03Rik in Genome Data Viewer
Location:
7 F3; 7 73.43 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (130740076..130748012, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (131138347..131146283, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_20273 Neighboring gene STARR-seq mESC enhancer starr_20276 Neighboring gene HtrA serine peptidase 1 Neighboring gene STARR-seq mESC enhancer starr_20277 Neighboring gene STARR-seq mESC enhancer starr_20278 Neighboring gene deleted in malignant brain tumors 1 Neighboring gene RIKEN cDNA 1700029B22 gene Neighboring gene CUB domain containing protein 3 Neighboring gene deleted in malignant brain tumors 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1)  1 citation
  • Targeted (1) 

General protein information

Preferred Names
uncharacterized protein C10orf120 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173409.4NP_775585.1  uncharacterized protein C10orf120 homolog

    See identical proteins and their annotated locations for NP_775585.1

    Status: PROVISIONAL

    Source sequence(s)
    BC115646
    Consensus CDS
    CCDS40156.1
    UniProtKB/Swiss-Prot
    Q8CDT9
    Related
    ENSMUSP00000070291.4, ENSMUST00000070980.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    130740076..130748012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)