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Fgl1 fibrinogen-like protein 1 [ Mus musculus (house mouse) ]

Gene ID: 234199, updated on 28-Oct-2024

Summary

Official Symbol
Fgl1provided by MGI
Official Full Name
fibrinogen-like protein 1provided by MGI
Primary source
MGI:MGI:102795
See related
Ensembl:ENSMUSG00000031594 AllianceGenome:MGI:102795
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mfire1
Summary
Enables identical protein binding activity. Involved in negative regulation of T cell activation; regulation of immune response; and response to stilbenoid. Acts upstream of or within adipose tissue development; cholesterol metabolic process; and regulation of glucose metabolic process. Located in extracellular region. Orthologous to human FGL1 (fibrinogen like 1). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Restricted expression toward liver E18 (RPKM 174.3) See more
Orthologs
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Genomic context

See Fgl1 in Genome Data Viewer
Location:
8 A4; 8 23.89 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (41644471..41671015, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (41191434..41217978, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene mitochondrial tumor suppressor 1 Neighboring gene predicted gene 16193 Neighboring gene STARR-seq mESC enhancer starr_21283 Neighboring gene STARR-seq mESC enhancer starr_21286 Neighboring gene predicted gene, 39167 Neighboring gene STARR-seq mESC enhancer starr_21287 Neighboring gene STARR-seq mESC enhancer starr_21288 Neighboring gene predicted gene 16348 Neighboring gene pericentriolar material 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (3)  1 citation

General gene information

Markers

Clone Names

  • MGC37822

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in adaptive immune response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within adipose tissue development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 
involved_in cell-matrix adhesion IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cholesterol metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in hepatocyte proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in hepatocyte proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of T cell activation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of T cell activation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in platelet aggregation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of glucose metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of immune response IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to stilbenoid IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in collagen-containing extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
fibrinogen-like protein 1
Names
MFIRE-1
fibrinogen-related protein 1
liver fibrinogen-related protein-1
mfrep-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145594.2NP_663569.2  fibrinogen-like protein 1 precursor

    See identical proteins and their annotated locations for NP_663569.2

    Status: VALIDATED

    Source sequence(s)
    AC156554, AF478470
    Consensus CDS
    CCDS22260.1
    UniProtKB/Swiss-Prot
    Q71KU9, Q8VC25
    UniProtKB/TrEMBL
    A0A0R4J0E1
    Related
    ENSMUSP00000034003.5, ENSMUST00000034003.5
    Conserved Domains (1) summary
    cd00087
    Location:80306
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    41644471..41671015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011242187.1XP_011240489.1  fibrinogen-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011240489.1

    UniProtKB/Swiss-Prot
    Q71KU9, Q8VC25
    UniProtKB/TrEMBL
    A0A0R4J0E1
    Conserved Domains (1) summary
    cd00087
    Location:80306
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
  2. XM_011242188.4XP_011240490.1  fibrinogen-like protein 1 isoform X2

    Conserved Domains (1) summary
    cl00085
    Location:80199
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...