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Gnat3 G protein subunit alpha transducin 3 [ Mus musculus (house mouse) ]

Gene ID: 242851, updated on 2-Nov-2024

Summary

Official Symbol
Gnat3provided by MGI
Official Full Name
G protein subunit alpha transducin 3provided by MGI
Primary source
MGI:MGI:3588268
See related
Ensembl:ENSMUSG00000028777 AllianceGenome:MGI:3588268
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gtn; Hg1e; Ggust
Summary
Enables GTPase activity. Acts upstream of or within G protein-coupled receptor signaling pathway and sensory perception of taste. Located in cytoplasm. Part of heterotrimeric G-protein complex. Is expressed in alimentary system and liver. Orthologous to human GNAT3 (G protein subunit alpha transducin 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Gnat3 in Genome Data Viewer
Location:
5 A3; 5 8.14 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (18167568..18224666)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (17962570..18019668)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr5:17322004-17322304 Neighboring gene STARR-positive B cell enhancer ABC_E6307 Neighboring gene STARR-positive B cell enhancer ABC_E8043 Neighboring gene CD36 molecule Neighboring gene STARR-positive B cell enhancer ABC_E9632 Neighboring gene STARR-seq mESC enhancer starr_12500 Neighboring gene predicted gene, 31612 Neighboring gene STARR-positive B cell enhancer mm9_chr5:17515822-17516123 Neighboring gene STARR-positive B cell enhancer ABC_E2153 Neighboring gene STARR-seq mESC enhancer starr_12501 Neighboring gene predicted gene, 54321 Neighboring gene STARR-seq mESC enhancer starr_12503 Neighboring gene STARR-seq mESC enhancer starr_12504 Neighboring gene STARR-seq mESC enhancer starr_12507 Neighboring gene STARR-seq mESC enhancer starr_12508 Neighboring gene STARR-seq mESC enhancer starr_12509 Neighboring gene STARR-seq mESC enhancer starr_12510 Neighboring gene G protein subunit alpha i1 Neighboring gene STARR-seq mESC enhancer starr_12511 Neighboring gene predicted gene 3527 Neighboring gene STARR-seq mESC enhancer starr_12512 Neighboring gene predicted gene, 31752

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G-protein beta/gamma-subunit complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G-protein beta/gamma-subunit complex binding IEA
Inferred from Electronic Annotation
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTP binding ISO
Inferred from Sequence Orthology
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables GTPase activity ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in acrosomal vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 
located_in axoneme ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
part_of heterotrimeric G-protein complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of heterotrimeric G-protein complex IPI
Inferred from Physical Interaction
more info
PubMed 
is_active_in photoreceptor inner segment IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in photoreceptor outer segment IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
guanine nucleotide-binding protein G(t) subunit alpha-3
Names
alpha-gustducin
guanine nucleotide binding protein, alpha transducing 3
gustducin alpha-3 chain
heterotrimeric guanine nucleotide-binding protein 1e
NP_001074612.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081143.1NP_001074612.1  guanine nucleotide-binding protein G(t) subunit alpha-3

    See identical proteins and their annotated locations for NP_001074612.1

    Status: PROVISIONAL

    Source sequence(s)
    AC129572
    Consensus CDS
    CCDS39017.1
    UniProtKB/Swiss-Prot
    Q3V3I2
    UniProtKB/TrEMBL
    B2RVZ3
    Related
    ENSMUSP00000030561.8, ENSMUST00000030561.9
    Conserved Domains (1) summary
    cd00066
    Location:34348
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    18167568..18224666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)