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SAMD00019534_045930 hypothetical protein [ Acytostelium subglobosum LB1 ]

Gene ID: 24519920, updated on 28-Dec-2023

Summary

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Gene symbol
SAMD00019534_045930
Gene description
hypothetical protein
Locus tag
SAMD00019534_045930
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Acytostelium subglobosum LB1 (strain: LB1)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Acytostelium
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Genomic context

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Exon count:
2

NW_012236525.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012236525.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_012755537.1
  • ASU04610;
    gene_4565;
    homolog of Dictyostelium discoideum rps21

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012236525.1 Reference assembly

    Range
    511704..512492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012900083.1 → XP_012755537.1  hypothetical protein SAMD00019534_045930 [Acytostelium subglobosum LB1]

    See identical proteins and their annotated locations for XP_012755537.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    pfam01249
    Location:1 → 76
    Ribosomal_S21e; Ribosomal protein S21e
Nucleotide Protein
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