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Pnma3 paraneoplastic antigen MA3 [ Mus musculus (house mouse) ]

Gene ID: 245468, updated on 28-Oct-2024

Summary

Official Symbol
Pnma3provided by MGI
Official Full Name
paraneoplastic antigen MA3provided by MGI
Primary source
MGI:MGI:2180565
See related
Ensembl:ENSMUSG00000046287 AllianceGenome:MGI:2180565
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be located in nucleolus. Is expressed in brain. Orthologous to human PNMA3 (PNMA family member 3). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See Pnma3 in Genome Data Viewer
Location:
X A7.3; X 37.29 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (72108393..72111797)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (73064787..73068191)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene paraneoplastic antigen family 5 Neighboring gene predicted gene, 52421 Neighboring gene STARR-seq mESC enhancer starr_47341 Neighboring gene paraneoplastic antigen MA3 pseudogene Neighboring gene X-linked lymphocyte-regulated 4A Neighboring gene X-linked lymphocyte-regulated 3A

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC40840

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
paraneoplastic antigen Ma3 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153169.2NP_694809.1  paraneoplastic antigen Ma3 homolog

    See identical proteins and their annotated locations for NP_694809.1

    Status: VALIDATED

    Source sequence(s)
    BC036726
    Consensus CDS
    CCDS30192.1
    UniProtKB/Swiss-Prot
    Q3URF3, Q8JZW8
    Related
    ENSMUSP00000054177.7, ENSMUST00000060418.8
    Conserved Domains (1) summary
    pfam14893
    Location:1326
    PNMA; PNMA

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    72108393..72111797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)