U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rbr rubrerythrin [ Candidatus Methanoplasma termitum ]

Gene ID: 24818155, updated on 22-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
rbr
Gene description
rubrerythrin
Locus tag
Mpt1_RS02405
Gene type
protein coding
Organism
Candidatus Methanoplasma termitum (strain: MpT1)
Lineage
Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma
Old locus tag
Mpt1_c04860
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP010070.1Genomic Context describing neighboring genes Neighboring gene zinc ribbon domain-containing protein Neighboring gene zinc-ribbon domain-containing protein Neighboring gene PH domain-containing protein Neighboring gene lipopolysaccharide assembly protein LapB Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP010070.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Role of rubrerythrin in the oxidative stress response of Porphyromonas gingivalis. Sztukowska M, et al. Mol Microbiol, 2002 Apr. PMID 11972784
  2. Rubrerythrin from Clostridium perfringens: cloning of the gene, purification of the protein, and characterization of its superoxide dismutase function. Lehmann Y, et al. J Bacteriol, 1996 Dec. PMID 8955396, Free PMC Article
  3. Isolation and characterization of rubrerythrin, a non-heme iron protein from Desulfovibrio vulgaris that contains rubredoxin centers and a hemerythrin-like binuclear iron cluster. LeGall J, et al. Biochemistry, 1988 Mar 8. PMID 2835096
  4. Pathway for H2O2 and O2 detoxification in Clostridium acetobutylicum. Riebe O, et al. Microbiology (Reading), 2009 Jan. PMID 19118342, Free PMC Article
  5. The structure of Desulfovibrio vulgaris rubrerythrin reveals a unique combination of rubredoxin-like FeS4 and ferritin-like diiron domains. deMaré F, et al. Nat Struct Biol, 1996 Jun. PMID 8646540

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
rubrerythrin
WP_048111754.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP010070.1 Reference assembly

    Range
    513356..513895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_048111754.1 rubrerythrin [Candidatus Methanoplasma termitum]

    See identical proteins and their annotated locations for WP_048111754.1

    UniProtKB/TrEMBL
    A0A0A7LBI2
    Conserved Domains (3) summary
    cd01041
    Location:7 → 131
    Rubrerythrin; Rubrerythrin, ferritin-like diiron-binding domain
    COG1592
    Location:4 → 174
    YotD; Rubrerythrin [Energy production and conversion]
    cl00202
    Location:146 → 174
    rubredoxin_like; Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases