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Smo smoothened, frizzled class receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 25273, updated on 2-Nov-2024

Summary

Official Symbol
Smoprovided by RGD
Official Full Name
smoothened, frizzled class receptorprovided by RGD
Primary source
RGD:3726
See related
EnsemblRapid:ENSRNOG00000008332 AllianceGenome:RGD:3726
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Smoh
Summary
Predicted to enable several functions, including cAMP-dependent protein kinase inhibitor activity; oxysterol binding activity; and patched binding activity. Involved in several processes, including negative regulation of hepatocyte proliferation; neuron projection development; and positive regulation of hepatic stellate cell activation. Located in axonal growth cone; dendritic growth cone; and neuronal cell body. Is active in postsynapse. Used to study Barrett's esophagus; esophagus adenocarcinoma; liver cirrhosis; and middle cerebral artery infarction. Biomarker of ocular hypertension; pancreatitis; pre-malignant neoplasm; and visual epilepsy. Human ortholog(s) of this gene implicated in basal cell carcinoma; hepatocellular carcinoma; malignant pleural mesothelioma; pancreatic cancer; and pancreatic ductal carcinoma. Orthologous to human SMO (smoothened, frizzled class receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Uterus (RPKM 82.7), Kidney (RPKM 58.7) and 9 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Smo in Genome Data Viewer
Location:
4q22
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (59311084..59341280)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (58343626..58373823)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (57019941..57041779)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120102481 Neighboring gene small nuclear ribonucleoprotein polypeptide G, pseudogene 6 Neighboring gene tetraspanin 33 Neighboring gene uncharacterized LOC120102483 Neighboring gene adenosylhomocysteinase-like 2 Neighboring gene large ribosomal subunit protein eL19-like

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables cAMP-dependent protein kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables cAMP-dependent protein kinase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
enables oxysterol binding IEA
Inferred from Electronic Annotation
more info
 
enables oxysterol binding ISO
Inferred from Sequence Orthology
more info
 
enables oxysterol binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables patched binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables patched binding IEA
Inferred from Electronic Annotation
more info
 
enables patched binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase A catalytic subunit binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase A catalytic subunit binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase A catalytic subunit binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein sequestering activity IEA
Inferred from Electronic Annotation
more info
 
enables protein sequestering activity ISO
Inferred from Sequence Orthology
more info
 
enables protein sequestering activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in alpha-tubulin acetylation ISO
Inferred from Sequence Orthology
more info
 
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within anterior/posterior pattern specification ISO
Inferred from Sequence Orthology
more info
 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in astrocyte activation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within astrocyte activation ISO
Inferred from Sequence Orthology
more info
 
involved_in atrial septum morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within atrial septum morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in axon extension involved in axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cell development ISO
Inferred from Sequence Orthology
more info
 
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell fate specification ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to cholesterol IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to cholesterol ISO
Inferred from Sequence Orthology
more info
 
involved_in central nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within central nervous system development ISO
Inferred from Sequence Orthology
more info
 
involved_in central nervous system neuron differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within central nervous system neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in cerebellar cortex morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cerebellar cortex morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in cerebral cortex development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cerebral cortex development ISO
Inferred from Sequence Orthology
more info
 
involved_in commissural neuron axon guidance IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in commissural neuron axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in contact inhibition IEA
Inferred from Electronic Annotation
more info
 
involved_in contact inhibition ISO
Inferred from Sequence Orthology
more info
 
involved_in dentate gyrus development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within dentate gyrus development ISO
Inferred from Sequence Orthology
more info
 
involved_in determination of left/right asymmetry in lateral mesoderm IEA
Inferred from Electronic Annotation
more info
 
involved_in determination of left/right asymmetry in lateral mesoderm ISO
Inferred from Sequence Orthology
more info
 
involved_in determination of left/right asymmetry in lateral mesoderm ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within determination of left/right symmetry ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within developmental growth ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within digestive tract development ISO
Inferred from Sequence Orthology
more info
 
involved_in dopaminergic neuron differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within dopaminergic neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in dorsal/ventral neural tube patterning IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within dorsal/ventral neural tube patterning ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within dorsal/ventral pattern formation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within embryonic organ development ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in epithelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in epithelial-mesenchymal cell signaling IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within epithelial-mesenchymal cell signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in facial nerve development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in forebrain morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in forebrain morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in forebrain morphogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in gene expression IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within gene expression ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of hair follicle development ISO
Inferred from Sequence Orthology
more info
 
involved_in hair follicle morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within hair follicle morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in heart looping IEA
Inferred from Electronic Annotation
more info
 
involved_in heart looping ISO
Inferred from Sequence Orthology
more info
 
involved_in heart looping ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within heart morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in homeostasis of number of cells within a tissue IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within homeostasis of number of cells within a tissue ISO
Inferred from Sequence Orthology
more info
 
involved_in in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within in utero embryonic development ISO
Inferred from Sequence Orthology
more info
 
involved_in left/right axis specification IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within left/right axis specification ISO
Inferred from Sequence Orthology
more info
 
involved_in mammary gland epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within mammary gland epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in mesenchymal to epithelial transition IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mesenchymal to epithelial transition involved in metanephric renal vesicle formation IEA
Inferred from Electronic Annotation
more info
 
involved_in mesenchymal to epithelial transition involved in metanephric renal vesicle formation ISO
Inferred from Sequence Orthology
more info
 
involved_in mesenchymal to epithelial transition involved in metanephric renal vesicle formation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in midgut development IEA
Inferred from Electronic Annotation
more info
 
involved_in midgut development ISO
Inferred from Sequence Orthology
more info
 
involved_in midgut development ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within multicellular organism growth ISO
Inferred from Sequence Orthology
more info
 
involved_in myoblast migration IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within myoblast migration ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of epithelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of gene expression ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of hair follicle development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of hair follicle development ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of hepatocyte proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within neural crest cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in neuroblast proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of neuroblast proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in neuron projection regeneration IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in odontogenesis of dentin-containing tooth IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within odontogenesis of dentin-containing tooth ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within ossification ISO
Inferred from Sequence Orthology
more info
 
involved_in osteoblast differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in osteoblast differentiation IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within osteoblast differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in pancreas morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within pancreas morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in pattern specification process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within pattern specification process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of autophagy IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of branching involved in ureteric bud morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of branching involved in ureteric bud morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of branching involved in ureteric bud morphogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of epithelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of hepatic stellate cell activation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of mesenchymal cell proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of mesenchymal cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of multicellular organism growth ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of neural precursor cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of neuroblast proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of neuroblast proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of organ growth IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of organ growth ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of protein import into nucleus ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of smoothened signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of positive regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of vascular associated smooth muscle cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of protein import into nucleus ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within protein localization to nucleus ISO
Inferred from Sequence Orthology
more info
 
involved_in protein stabilization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein stabilization ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of heart morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of heart morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of somatic stem cell population maintenance IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of somatic stem cell population maintenance ISO
Inferred from Sequence Orthology
more info
 
involved_in response to inositol IEA
Inferred from Electronic Annotation
more info
 
involved_in skeletal muscle fiber development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within skeletal muscle fiber development ISO
Inferred from Sequence Orthology
more info
 
involved_in smooth muscle tissue development IEA
Inferred from Electronic Annotation
more info
 
involved_in smooth muscle tissue development ISO
Inferred from Sequence Orthology
more info
 
involved_in smoothened signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within smoothened signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in smoothened signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in smoothened signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in somite development IEA
Inferred from Electronic Annotation
more info
 
involved_in somite development ISO
Inferred from Sequence Orthology
more info
 
involved_in somite development ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in spermatogenesis IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in spinal cord dorsal/ventral patterning IEA
Inferred from Electronic Annotation
more info
 
involved_in spinal cord dorsal/ventral patterning ISO
Inferred from Sequence Orthology
more info
 
involved_in thalamus development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within thalamus development ISO
Inferred from Sequence Orthology
more info
 
involved_in type B pancreatic cell development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within type B pancreatic cell development ISO
Inferred from Sequence Orthology
more info
 
involved_in vasculogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within vasculogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in ventral midline determination IEA
Inferred from Electronic Annotation
more info
 
involved_in ventral midline determination ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in 9+0 non-motile cilium IEA
Inferred from Electronic Annotation
more info
 
located_in 9+0 non-motile cilium ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
is_active_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in axonal growth cone IDA
Inferred from Direct Assay
more info
PubMed 
located_in caveola IEA
Inferred from Electronic Annotation
more info
 
located_in caveola ISO
Inferred from Sequence Orthology
more info
 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 
located_in centriole ISO
Inferred from Sequence Orthology
more info
 
located_in ciliary membrane IEA
Inferred from Electronic Annotation
more info
 
located_in ciliary membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cilium ISO
Inferred from Sequence Orthology
more info
 
located_in cilium ISO
Inferred from Sequence Orthology
more info
 
located_in cilium ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in dendrite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
located_in dendritic growth cone IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum-Golgi intermediate compartment ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 
located_in late endosome ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 
is_active_in postsynapse IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
protein smoothened
Names
smoothened protein
smoothened, frizzled family receptor

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012807.2NP_036939.2  protein smoothened precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000004
    UniProtKB/TrEMBL
    A0A0G2JYI3, A6IEE6, G3V736
    Related
    ENSRNOP00000070665.2, ENSRNOT00000080223.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    59311084..59341280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063285578.1XP_063141648.1  protein smoothened isoform X1