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Amh anti-Mullerian hormone [ Rattus norvegicus (Norway rat) ]

Gene ID: 25378, updated on 2-Nov-2024

Summary

Official Symbol
Amhprovided by RGD
Official Full Name
anti-Mullerian hormoneprovided by RGD
Primary source
RGD:2108
See related
EnsemblRapid:ENSRNOG00000019377 AllianceGenome:RGD:2108
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
MIS
Summary
Enables transforming growth factor beta receptor binding activity. Involved in several processes, including negative regulation of ovarian follicle development; positive regulation of NF-kappaB transcription factor activity; and preantral ovarian follicle growth. Acts upstream of or within urogenital system development. Located in extracellular space. Human ortholog(s) of this gene implicated in disorder of sexual development; ovarian carcinoma; and persistent Mullerian duct syndrome. Orthologous to human AMH (anti-Mullerian hormone). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 20.2), Muscle (RPKM 8.9) and 8 other tissues See more
Orthologs
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Genomic context

See Amh in Genome Data Viewer
Location:
7q11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (9557451..9559867, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (8906776..8909192, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (11775155..11777503, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 1 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene junctional sarcoplasmic reticulum protein 1 Neighboring gene splicing factor 3A subunit 2 Neighboring gene pleckstrin homology domain containing J1 Neighboring gene DOT1 like histone lysine methyltransferase

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables transforming growth factor beta receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables type II transforming growth factor beta receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables type II transforming growth factor beta receptor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in Leydig cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in Leydig cell differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in Mullerian duct regression IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in Mullerian duct regression ISO
Inferred from Sequence Orthology
more info
 
involved_in Mullerian duct regression ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in Mullerian duct regression TAS
Traceable Author Statement
more info
PubMed 
involved_in anti-Mullerian hormone receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in anti-Mullerian hormone receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in gonadal mesoderm development IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of ovarian follicle development IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of ovarian follicle development ISO
Inferred from Sequence Orthology
more info
 
involved_in ovarian follicle development ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of NF-kappaB transcription factor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of SMAD protein signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in preantral ovarian follicle growth IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to organic cyclic compound IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to xenobiotic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in sex determination ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within urogenital system development IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
muellerian-inhibiting factor
Names
Anti - Mullerian hormone (Mulerian inhibiting substance)
anti-Muellerian hormone
muellerian-inhibiting substance

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012902.2NP_037034.1  muellerian-inhibiting factor precursor

    See identical proteins and their annotated locations for NP_037034.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/Swiss-Prot
    P49000
    UniProtKB/TrEMBL
    A6K8G0
    Related
    ENSRNOP00000026220.1, ENSRNOT00000026220.4
    Conserved Domains (2) summary
    smart00204
    Location:455553
    TGFB; Transforming growth factor-beta (TGF-beta) family
    pfam04709
    Location:74417
    AMH_N; Anti-Mullerian hormone, N terminal region

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    9557451..9559867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)