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sry1 serine racemase Sry1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538738, updated on 22-Jun-2024

Summary

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Gene symbol
sry1
Gene description
serine racemase Sry1
Locus tag
SPOM_SPCC320.14
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPCC330.15c
Old locus tag
SPCC320.14
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Genomic context

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See sry1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (138959..140297, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA-directed RNA polymerase III complex subunit Rpc37 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL24 Neighboring gene tRNA-Glu Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Inhibition of serine and proline racemases by substrate-product analogues. Harty M, et al. Bioorg Med Chem Lett, 2014 Jan 1. PMID 24314397
  2. Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe. Goto M, et al. J Biol Chem, 2009 Sep 18. PMID 19640845, Free PMC Article
  3. Serine racemase with catalytically active lysinoalanyl residue. Yamauchi T, et al. J Biochem, 2009 Apr. PMID 19155267
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ATP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables D-serine ammonia-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables D-serine ammonia-lyase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables L-serine ammonia-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables L-serine ammonia-lyase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables magnesium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables pyridoxal phosphate binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables pyridoxal phosphate binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables serine racemase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables serine racemase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables threonine racemase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in D-serine metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in L-serine metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
serine racemase Sry1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    138959..140297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022710.3 → NP_587715.1  serine racemase Sry1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587715.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59791
    Conserved Domains (1) summary
    PRK07048
    Location:4 → 322
    PRK07048; threo-3-hydroxy-L-aspartate ammonia-lyase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1V71_A.1
1WTC_A.1
2ZPU_A.1
2ZR8_A.1

Gene LinkOut

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