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duf89 cobalt/nickel-dependent phosphatase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538830, updated on 18-Sep-2024

Summary

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Official Symbol
duf89
Official Full Name
cobalt/nickel-dependent phosphatase
Primary source
PomBase:SPCC1393.13
Locus tag
SPOM_SPCC1393.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
prl64
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Genomic context

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See duf89 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (824998..827652)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein mL58 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene inorganic phosphate transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate. Sanchez AM, et al. J Biol Chem, 2022 May. PMID 35314193, Free PMC Article
  2. Systematic screen of Schizosaccharomyces pombe deletion collection uncovers parallel evolution of the phosphate signal transduction pathway in yeasts. Henry TC, et al. Eukaryot Cell, 2011 Feb. PMID 21169418, Free PMC Article
  3. A family of metal-dependent phosphatases implicated in metabolite damage-control. Huang L, et al. Nat Chem Biol, 2016 Aug. PMID 27322068, Free PMC Article
  4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  5. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables fructose 6-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables inorganic diphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables metal ion binding EXP
Inferred from Experiment
more info
 PubMed 
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cellular detoxification ISM
Inferred from Sequence Model
more info
 PubMed 
involved_in intracellular phosphate ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
cobalt/nickel-dependent phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    824998..827652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022962.3 → NP_587971.1  cobalt/nickel-dependent phosphatase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587971.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94725
    Conserved Domains (1) summary
    pfam01937
    Location:25 → 420
    DUF89; Protein of unknown function DUF89
Nucleotide Protein
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