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gem1 ERMES complex GTPase subunit Gem1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538910, updated on 18-Sep-2024

Summary

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Official Symbol
gem1
Official Full Name
ERMES complex GTPase subunit Gem1
Primary source
PomBase:SPCC320.04c
Locus tag
SPOM_SPCC320.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See gem1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
13
Sequence:
Chromosome: III; NC_003421.2 (163023..165664)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene RNA-binding protein Mde7 Neighboring gene sulphate transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium ion binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrion-endoplasmic reticulum membrane tethering IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of ERMES complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ERMES complex GTPase subunit Gem1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    163023..165664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022720.3 → NP_587725.1  ERMES complex GTPase subunit Gem1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587725.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59781
    Conserved Domains (6) summary
    cd01892
    Location:418 → 595
    Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
    cd01893
    Location:2 → 169
    Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
    COG1100
    Location:1 → 186
    Gem1; GTPase SAR1 family domain [General function prediction only]
    pfam08355
    Location:343 → 407
    EF_assoc_1; EF hand associated
    pfam08356
    Location:221 → 302
    EF_assoc_2; EF hand associated
    pfam13202
    Location:309 → 332
    EF-hand_5; EF hand
Nucleotide Protein
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Gene LinkOut

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