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SPOM_SPCC162.02C AMP-binding dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538929, updated on 22-Jun-2024

Summary

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Gene symbol
SPOM_SPCC162.02C
Gene description
AMP-binding dehydrogenase
Locus tag
SPOM_SPCC162.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPCC162.02c
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Genomic context

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See SPOM_SPCC162.02C in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1584361..1587560)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene wtf meiotic drive antidote Wtf13;wtf meiotic drive poison Wtf13 Neighboring gene ncRNA Neighboring gene dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U4/U5/U6 small nuclear ribonucleoprotein complex subunit Neighboring gene ncRNA Neighboring gene alcohol dehydrogenase Adh1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables catalytic activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
AMP-binding dehydrogenase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1584361..1587560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023232.3 → NP_588242.1  AMP-binding dehydrogenase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588242.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74419, P78776
    Conserved Domains (4) summary
    cd05235
    Location:646 → 912
    SDR_e1; extended (e) SDRs, subgroup 1
    COG0318
    Location:16 → 514
    CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
    COG3320
    Location:647 → 981
    Lys2b; Thioester reductase domain of alpha aminoadipate reductase Lys2 and NRPSs [Secondary metabolites biosynthesis, transport and catabolism]
    cl17068
    Location:44 → 518
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
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