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lnp1 protein lunapark [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538940, updated on 18-Sep-2024

Summary

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Official Symbol
lnp1
Official Full Name
protein lunapark
Primary source
PomBase:SPCC1620.07c
Locus tag
SPOM_SPCC1620.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See lnp1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003421.2 (2155261..2157518, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ribose-phosphate pyrophosphokinase Neighboring gene Rab geranylgeranyltransferase alpha subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene succinate-CoA ligase beta subunit Lsc2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lem2 and Lnp1 maintain the membrane boundary between the nuclear envelope and endoplasmic reticulum. Hirano Y, et al. Commun Biol, 2020 Jun 1. PMID 32483293, Free PMC Article
  2. Inner nuclear membrane protein Lem2 augments heterochromatin formation in response to nutritional conditions. Tange Y, et al. Genes Cells, 2016 Aug. PMID 27334362
  3. Control of heterochromatin localization and silencing by the nuclear membrane protein Lem2. Barrales RR, et al. Genes Dev, 2016 Jan 15. PMID 26744419, Free PMC Article
  4. Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. Egan ED, et al. RNA, 2014 Jun. PMID 24713849, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Lem2 and Lnp1 maintain the membrane boundary between the nuclear envelope and endoplasmic reticulum.
    Title: Lem2 and Lnp1 maintain the membrane boundary between the nuclear envelope and endoplasmic reticulum.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum tubular network membrane organization ISO
Inferred from Sequence Orthology
more info
  
involved_in endoplasmic reticulum tubular network organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in endoplasmic reticulum tubular network IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nuclear envelope IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein lunapark

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2155261..2157518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023456.3 → NP_588465.1  protein lunapark [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588465.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94414
    Conserved Domains (1) summary
    COG5415
    Location:1 → 264
    COG5415; Predicted integral membrane metal-binding protein [General function prediction only]
Nucleotide Protein
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