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uncharacterized protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538982, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
PomBase:SPCC1450.12
Locus tag
SPOM_SPCC1450.12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003421.2 (1754250..1757395)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene iron hydrogenase Neighboring gene serine/threonine protein kinase Cek1 Neighboring gene ncRNA Neighboring gene riboflavin synthase Rib5 Neighboring gene pig-F/3-ketosphinganine reductase fusion protein Neighboring gene ER protein folding oxidoreductin Ero1b Neighboring gene triacylglycerol lipase Ptl1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables phosphatidylinositol binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1754250..1757395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023301.3 → NP_588311.1  uncharacterized protein SPOM_SPCC1450.12 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588311.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7N9
    Conserved Domains (3) summary
    cd06869
    Location:167 → 306
    PX_UP2_fungi; The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins
    pfam12825
    Location:366 → 660
    DUF3818; Domain of unknown function in PX-proteins (DUF3818)
    pfam12828
    Location:5 → 131
    PXB; PX-associated
Nucleotide Protein
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