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dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539052, updated on 18-Sep-2024

Summary

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Official Full Name
dehydrogenase
Primary source
PomBase:SPCC663.09c
Locus tag
SPOM_SPCC663.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1649040..1650340, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene short chain dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA (uracil-O(2)-)-methyltransferase Neighboring gene ncRNA Neighboring gene splicing-associated factor Saf1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YKL071W from Saccharomyces cerevisiae encodes a novel aldehyde reductase for detoxification of glycolaldehyde and furfural derived from lignocellulose. Wang H, et al. Appl Microbiol Biotechnol, 2017 Dec. PMID 29034432
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables alcohol dehydrogenase (NAD+) activity ISO
Inferred from Sequence Orthology
more info
  
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cellular detoxification of aldehyde ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
dehydrogenase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1649040..1650340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023260.3 → NP_588270.1  dehydrogenase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588270.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q7Z9I2
    Conserved Domains (2) summary
    cd05325
    Location:8 → 253
    carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs
    pfam00106
    Location:6 → 198
    adh_short; short chain dehydrogenase
Nucleotide Protein
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