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rhp7 DNA repair protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539094, updated on 18-Sep-2024

Summary

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Official Symbol
rhp7
Official Full Name
DNA repair protein
Primary source
PomBase:SPCC330.02
Locus tag
SPOM_SPCC330.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rad7; SPCC613.14
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Genomic context

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See rhp7 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (105680..107848)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein meu23 Neighboring gene CLRC ubiquitin ligase complex WD repeat subunit Raf1/Dos1 Neighboring gene ncRNA Neighboring gene ATP-dependent helicase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the rhp7(+) and rhp16(+) genes in Schizosaccharomyces pombe. Lombaerts M, et al. Nucleic Acids Res, 1999 Sep 1. PMID 10446227, Free PMC Article
  2. Atl1 regulates choice between global genome and transcription-coupled repair of O(6)-alkylguanines. Latypov VF, et al. Mol Cell, 2012 Jul 13. PMID 22658721, Free PMC Article
  3. Repair of damaged and mismatched DNA by the XPC homologues Rhp41 and Rhp42 of fission yeast. Marti TM, et al. Genetics, 2003 Jun. PMID 12807767, Free PMC Article
  4. Histone H3 lysine 36 methyltransferase mobilizes NER factors to regulate tolerance against alkylation damage in fission yeast. Lim KK, et al. Nucleic Acids Res, 2018 Jun 1. PMID 29635344, Free PMC Article
  5. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitotic spindle pole body HDA PubMed 
part_of nucleotide-excision repair complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
DNA repair protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    105680..107848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022697.3 → NP_587702.1  DNA repair protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587702.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74999
    Conserved Domains (2) summary
    cd09293
    Location:210 → 452
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:269 → 321
    LRR_AMN1; leucine-rich repeat [structural motif]
Nucleotide Protein
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