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glutamate-1-semialdehyde 2,1-aminomutase aminotransferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539111, updated on 18-Sep-2024

Summary

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Official Full Name
glutamate-1-semialdehyde 2,1-aminomutase aminotransferase
Primary source
PomBase:SPCC417.11c
Locus tag
SPOM_SPCC417.11C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1697661..1699520, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene dipeptide transmembrane transporter Dal51 Neighboring gene ncRNA Neighboring gene carboxylesterase, type B family protein Neighboring gene tRNA-Asn

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables glutamate-1-semialdehyde 2,1-aminomutase activity ISM
Inferred from Sequence Model
more info
  
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in porphyrin-containing compound biosynthetic process ISM
Inferred from Sequence Model
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
glutamate-1-semialdehyde 2,1-aminomutase aminotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1697661..1699520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023278.3 → NP_588288.2  glutamate-1-semialdehyde 2,1-aminomutase aminotransferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588288.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94492
    Conserved Domains (2) summary
    COG0001
    Location:23 → 427
    HemL; Glutamate-1-semialdehyde aminotransferase [Coenzyme transport and metabolism]
    cl18945
    Location:28 → 427
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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