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yop1 ER membrane protein DP1/Yop1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539171, updated on 18-Sep-2024

Summary

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Official Symbol
yop1
Official Full Name
ER membrane protein DP1/Yop1
Primary source
PomBase:SPCC830.08c
Locus tag
SPOM_SPCC830.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See yop1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003421.2 (2195793..2197200, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene calcineurin regulatory subunit B Neighboring gene ncRNA Neighboring gene DNAJ domain-containing protein Psi1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Rnase P/MRP subunit Pop5 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The cortical ER network limits the permissive zone for actomyosin ring assembly. Zhang D, et al. Curr Biol, 2010 Jun 8. PMID 20434336
  2. Characterization of cwl1+, a gene from Schizosaccharomyces pombe whose overexpression causes cell lysis. Godoy C, et al. Yeast, 1996 Aug. PMID 8873452
  3. Plasma membrane tethering of the cortical ER necessitates its finely reticulated architecture. Zhang D, et al. Curr Biol, 2012 Nov 6. PMID 23041194
  4. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  5. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables membrane bending activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization EXP
Inferred from Experiment
more info
 PubMed 
involved_in endoplasmic reticulum tubular network membrane organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell division site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cortical endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in endoplasmic reticulum tubular network membrane EXP
Inferred from Experiment
more info
 PubMed 
is_active_in nuclear envelope IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ER membrane protein DP1/Yop1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2195793..2197200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023469.3 → NP_588478.1  ER membrane protein DP1/Yop1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588478.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UU91
    Conserved Domains (1) summary
    COG5052
    Location:3 → 182
    YOP1; Protein involved in membrane traffic [Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version

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