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tfb6 transcription factor TFIIH complex subunit Tfb6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539184, updated on 18-Sep-2024

Summary

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Official Symbol
tfb6
Official Full Name
transcription factor TFIIH complex subunit Tfb6
Primary source
PomBase:SPCC1494.09c
Locus tag
SPOM_SPCC1494.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tfb6 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (2342622..2343898, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene tRNA methylation protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor Adn3 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genetic screen to discover pathways affecting cohesin function in Schizosaccharomyces pombe identifies chromatin effectors. Chen Z, et al. G3 (Bethesda), 2012 Oct. PMID 23050226, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in nucleus HDA PubMed 
part_of transcription factor TFIIH holo complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transcription factor TFIIH complex subunit Tfb6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2342622..2343898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023522.3 → NP_588534.1  transcription factor TFIIH complex subunit Tfb6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588534.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O60083
    Conserved Domains (1) summary
    pfam17110
    Location:36 → 156
    TFB6; Subunit 11 of the general transcription factor TFIIH
Nucleotide Protein
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