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sfc4 transcription factor TFIIIC subunit Sfc4 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539187, updated on 18-Sep-2024

Summary

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Official Symbol
sfc4
Official Full Name
transcription factor TFIIIC subunit Sfc4
Primary source
PomBase:SPCC16C4.14c
Locus tag
SPOM_SPCC16C4.14C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sfc4 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (691825..694934, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein uL11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein uL2m

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A role for TFIIIC transcription factor complex in genome organization. Noma K, et al. Cell, 2006 Jun 2. PMID 16751097
  2. The Fun30 chromatin remodeler Fft3 controls nuclear organization and chromatin structure of insulators and subtelomeres in fission yeast. Steglich B, et al. PLoS Genet, 2015 Mar. PMID 25798942, Free PMC Article
  3. Isolation and cloning of four subunits of a fission yeast TFIIIC complex that includes an ortholog of the human regulatory protein TFIIICbeta. Huang Y, et al. J Biol Chem, 2000 Oct 6. PMID 10906331
  4. tRNA production links nutrient conditions to the onset of sexual differentiation through the TORC1 pathway. Otsubo Y, et al. EMBO Rep, 2018 Mar. PMID 29330317, Free PMC Article
  5. Interaction between TBP and Condensin Drives the Organization and Faithful Segregation of Mitotic Chromosomes. Iwasaki O, et al. Mol Cell, 2015 Sep 3. PMID 26257282, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA polymerase III general transcription initiation factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
contributes_to chromatin insulator sequence binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase III IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase III promoter IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
part_of transcription factor TFIIIC complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of transcription factor TFIIIC complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TFIIIC subunit Sfc4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    691825..694934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022915.3 → NP_587924.1  transcription factor TFIIIC subunit Sfc4 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587924.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74458
    Conserved Domains (2) summary
    sd00006
    Location:434 → 459
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:131 → 202
    TPR_11; TPR repeat
Nucleotide Protein
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