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dim1 U4/U6 x U5 tri-snRNP complex subunit Dim1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539369, updated on 18-Sep-2024

Summary

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Official Symbol
dim1
Official Full Name
U4/U6 x U5 tri-snRNP complex subunit Dim1
Primary source
PomBase:SPCC16A11.05c
Locus tag
SPOM_SPCC16A11.05C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See dim1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003421.2 (877804..878671, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene sorting nexin Snx12 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pig-B family GPI synthesis protein Neighboring gene ncRNA Neighboring gene ubiquinone-binding protein Coq10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast dim1(+) encodes a functionally conserved polypeptide essential for mitosis. Berry LD, et al. J Cell Biol, 1997 Jun 16. PMID 9182666, Free PMC Article
  2. The schizosaccharomyces pombe dim1(+) gene interacts with the anaphase-promoting complex or cyclosome (APC/C) component lid1(+) and is required for APC/C function. Berry LD, et al. Mol Cell Biol, 1999 Apr. PMID 10082519, Free PMC Article
  3. Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex. Carnahan RH, et al. Eukaryot Cell, 2005 Mar. PMID 15755920, Free PMC Article
  4. The histone variant H2A.Z promotes splicing of weak introns. Nissen KE, et al. Genes Dev, 2017 Apr 1. PMID 28446597, Free PMC Article
  5. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of U5 snRNP IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
U4/U6 x U5 tri-snRNP complex subunit Dim1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    877804..878671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022983.3 → NP_587992.1  U4/U6 x U5 tri-snRNP complex subunit Dim1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587992.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P87215
    Conserved Domains (1) summary
    pfam02966
    Location:4 → 136
    DIM1; Mitosis protein DIM1
Nucleotide Protein
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