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ekc1 protein phosphatase regulatory subunit Ekc1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539511, updated on 18-Sep-2024

Summary

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Official Symbol
ekc1
Official Full Name
protein phosphatase regulatory subunit Ekc1
Primary source
PomBase:SPCC663.01c
Locus tag
SPOM_SPCC663.01C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPCC777.16c
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Genomic context

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See ekc1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1625987..1629374, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene retromer complex subunit Vps35 Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase Prp4 Neighboring gene tRNA dihydrouridine synthase Dus4 Neighboring gene ncRNA Neighboring gene wtf element Wtf14 Neighboring gene wtf element Wtf15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The role of Ppe1/PP6 phosphatase for equal chromosome segregation in fission yeast kinetochore. Goshima G, et al. EMBO J, 2003 Jun 2. PMID 12773390, Free PMC Article
  2. Phosphatases Generate Signal Specificity Downstream of Ssp1 Kinase in Fission Yeast. Deng L, et al. Mol Cell Biol, 2017 May 15. PMID 28223368, Free PMC Article
  3. Schizosaccharomyces pombe cell division cycle under limited glucose requires Ssp1 kinase, the putative CaMKK, and Sds23, a PP2A-related phosphatase inhibitor. Hanyu Y, et al. Genes Cells, 2009 May. PMID 19371376
  4. Suppressor screening reveals common kleisin-hinge interaction in condensin and cohesin, but different modes of regulation. Xu X, et al. Proc Natl Acad Sci U S A, 2019 May 28. PMID 31072933, Free PMC Article
  5. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein phosphatase activator activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
  
enables protein phosphatase regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in negative regulation of kinetochore assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in signaling NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of protein serine/threonine phosphatase complex IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase regulatory subunit Ekc1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1625987..1629374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023253.3 → NP_588263.2  protein phosphatase regulatory subunit Ekc1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588263.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74511, O74554
    Conserved Domains (1) summary
    pfam04499
    Location:141 → 653
    SAPS; SIT4 phosphatase-associated protein
Nucleotide Protein
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