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cdc73 Cdc73 family RNA polymerase II accessory factor [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539616, updated on 18-Sep-2024

Summary

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Official Symbol
cdc73
Official Full Name
Cdc73 family RNA polymerase II accessory factor
Primary source
PomBase:SPBC17G9.02c
Locus tag
SPOM_SPBC17G9.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See cdc73 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (2169820..2171301, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene WD repeat protein Neighboring gene ATP-dependent RNA helicase Prp16 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene lysine--tRNA (Lys) ligase Krs1 Neighboring gene nucleoporin Nup85

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global regulation of heterochromatin spreading by Leo1. Verrier L, et al. Open Biol, 2015 May. PMID 25972440, Free PMC Article
  2. The PAF complex and Prf1/Rtf1 delineate distinct Cdk9-dependent pathways regulating transcription elongation in fission yeast. Mbogning J, et al. PLoS Genet, 2013. PMID 24385927, Free PMC Article
  3. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article
  4. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  5. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA polymerase II complex binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Cdc73/Paf1 complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
Cdc73 family RNA polymerase II accessory factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2169820..2171301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021798.3 → NP_595891.1  Cdc73 family RNA polymerase II accessory factor [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595891.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUE7
    Conserved Domains (2) summary
    COG5157
    Location:1 → 364
    CDC73; RNA polymerase II assessory factor [Transcription]
    pfam05179
    Location:202 → 358
    CDC73_C; RNA pol II accessory factor, Cdc73 family, C-terminal
Nucleotide Protein
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