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cup1 protein cup1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539657, updated on 18-Sep-2024

Summary

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Official Symbol
cup1
Official Full Name
protein cup1
Primary source
PomBase:SPBC17G9.13c
Locus tag
SPOM_SPBC17G9.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
lyr1
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Genomic context

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See cup1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2196424..2197741, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene pyruvate carboxylase Pyr1 Neighboring gene ncRNA Neighboring gene hydrolase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Epigenetic gene silencing by heterochromatin primes fungal resistance. Torres-Garcia S, et al. Nature, 2020 Sep. PMID 32908306, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in mitochondrial gene expression NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein cup1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2196424..2197741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021809.3 → NP_595902.1  protein cup1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595902.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUD9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials