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gpi16 pig-T family GPI synthesis protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539759, updated on 22-Jun-2024

Summary

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Gene symbol
gpi16
Gene description
pig-T family GPI synthesis protein
Locus tag
SPOM_SPBC1604.15
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC1604.15
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Genomic context

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See gpi16 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3900976..3904579, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ESCRT III complex subunit Neighboring gene ncRNA Neighboring gene G-patch type RNA-binding protein Neighboring gene protein Tti2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PAK-like kinase Shk1 Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein bL32m

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum HDA PubMed 

General protein information

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Preferred Names
pig-T family GPI synthesis protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3900976..3904579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022546.3 → NP_596625.1  pig-T family GPI synthesis protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596625.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94380
    Conserved Domains (1) summary
    pfam04113
    Location:9 → 535
    Gpi16; Gpi16 subunit, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials