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set10 ribosomal lysine methyltransferase Set10 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539820, updated on 18-Sep-2024

Summary

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Official Symbol
set10
Official Full Name
ribosomal lysine methyltransferase Set10
Primary source
PomBase:SPBC1709.13c
Locus tag
SPOM_SPBC1709.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See set10 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1124433..1126280, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene chromatin modification family protein Png2 Neighboring gene ncRNA Neighboring gene GTPase-binding protein Rid1 Neighboring gene ncRNA Neighboring gene peptide N-glycanase Neighboring gene mRNA processing protein Cft2 Neighboring gene aromatic ring-opening dioxygenase Neighboring gene putative folylpolyglutamate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global analysis of gel mobility of proteins and its use in target identification. Shirai A, et al. J Biol Chem, 2008 Apr 18. PMID 18292091
  2. The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast. Fontebasso Y, et al. DNA Repair (Amst), 2013 Dec. PMID 24192486, Free PMC Article
  3. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein-lysine N-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein-lysine N-methyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ribosomal lysine methyltransferase Set10

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1124433..1126280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021355.3 → NP_595446.1  ribosomal lysine methyltransferase Set10 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595446.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74738
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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