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cnt5 centaurin Cnt5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539865, updated on 18-Sep-2024

Summary

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Official Symbol
cnt5
Official Full Name
centaurin Cnt5
Primary source
PomBase:SPBC17G9.08c
Locus tag
SPOM_SPBC17G9.08C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
csx2
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Genomic context

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See cnt5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003423.3 (2181576..2184865, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RRM-containing cyclophilin Rct1 Neighboring gene siderophore-iron biosynthesis protein Neighboring gene 40S ribosomal protein eS24 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Centaurin-like protein Cnt5 contributes to arsenic and cadmium resistance in fission yeast. Vashisht AA, et al. FEMS Yeast Res, 2009 Mar. PMID 19076239, Free PMC Article
  2. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  3. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTPase activator activity ISM
Inferred from Sequence Model
more info
  
enables phospholipid binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
centaurin Cnt5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2181576..2184865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021804.3 → NP_595897.1  centaurin Cnt5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595897.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09425, Q9UUE2
    Conserved Domains (6) summary
    cd07608
    Location:257 → 455
    BAR_ArfGAP_fungi; The Bin/Amphiphysin/Rvs (BAR) domain of uncharacterized fungal Arf GAP proteins
    COG5347
    Location:671 → 870
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    pfam00169
    Location:532 → 614
    PH; PH domain
    pfam01412
    Location:674 → 787
    ArfGap; Putative GTPase activating protein for Arf
    sd00045
    Location:791 → 821
    ANK; ANK repeat [structural motif]
    cl17171
    Location:513 → 614
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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