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rid1 GTPase-binding protein Rid1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539894, updated on 18-Sep-2024

Summary

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Official Symbol
rid1
Official Full Name
GTPase-binding protein Rid1
Primary source
PomBase:SPBC1709.12
Locus tag
SPOM_SPBC1709.12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rid1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (1122799..1126031)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cu chaperone Atx1 Neighboring gene chromatin modification family protein Png2 Neighboring gene ncRNA Neighboring gene ribosomal lysine methyltransferase Set10 Neighboring gene ncRNA Neighboring gene peptide N-glycanase Neighboring gene aromatic ring-opening dioxygenase Neighboring gene mRNA processing protein Cft2 Neighboring gene putative folylpolyglutamate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  2. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
enables small GTPase binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in actin cytoskeleton organization ISM
Inferred from Sequence Model
more info
  
Component Evidence Code Pubs
is_active_in cell division site HDA PubMed 
is_active_in cell tip HDA PubMed 
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
GTPase-binding protein Rid1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1122799..1126031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021354.3 → NP_595445.2  GTPase-binding protein Rid1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595445.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74737
    Conserved Domains (1) summary
    pfam06371
    Location:41 → 193
    Drf_GBD; Diaphanous GTPase-binding Domain
Nucleotide Protein
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