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tfg2 transcription factor TFIIF complex beta subunit Tfg2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539924, updated on 18-Sep-2024

Summary

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Official Symbol
tfg2
Official Full Name
transcription factor TFIIF complex beta subunit Tfg2
Primary source
PomBase:SPBC1198.13c
Locus tag
SPOM_SPBC1198.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPBC660.03c
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Genomic context

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See tfg2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (194038..197147, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene asparagine--tRNA (Asn) ligase Slm5 Neighboring gene ubiquitin conjugating enzyme Ubc16 Neighboring gene ncRNA Neighboring gene RNA polymerase I transcription termination factor/ RNA polymerase II transcription factor Reb1 Neighboring gene ncRNA Neighboring gene ubiquitin ligase Mfr1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene fructose-1,6-bisphosphatase Fbp1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glyceraldehyde-3-phosphate dehydrogenase and actin associate with RNA polymerase II and interact with its Rpb7 subunit. Mitsuzawa H, et al. FEBS Lett, 2005 Jan 3. PMID 15620689
  2. Tfg3, a subunit of the general transcription factor TFIIF in Schizosaccharomyces pombe, functions under stress conditions. Kimura M, et al. Nucleic Acids Res, 2004. PMID 15616156, Free PMC Article
  3. Studies of Schizosaccharomyces pombe TFIIE indicate conformational and functional changes in RNA polymerase II at transcription initiation. Hayashi K, et al. Genes Cells, 2005 Mar. PMID 15743411
  4. Formation of a carboxy-terminal domain phosphatase (Fcp1)/TFIIF/RNA polymerase II (pol II) complex in Schizosaccharomyces pombe involves direct interaction between Fcp1 and the Rpb4 subunit of pol II. Kimura M, et al. Mol Cell Biol, 2002 Mar. PMID 11839823, Free PMC Article
  5. Mediator is required for activated transcription in a Schizosaccharomyces pombe in vitro system. Tamayo E, et al. Eur J Biochem, 2004 Jun. PMID 15182371

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity EXP
Inferred from Experiment
more info
 PubMed 
enables RNA polymerase II general transcription initiation factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter EXP
Inferred from Experiment
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in nucleus HDA PubMed 
part_of transcription factor TFIIF complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transcription factor TFIIF complex beta subunit Tfg2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    194038..197147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020988.3 → NP_595082.1  transcription factor TFIIF complex beta subunit Tfg2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595082.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94424
    Conserved Domains (1) summary
    COG5090
    Location:1 → 307
    TFG2; Transcription initiation factor IIF, small subunit (RAP30) [Transcription]
Nucleotide Protein
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