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trm11 tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540011, updated on 22-Jun-2024

Summary

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Gene symbol
trm11
Gene description
tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11
Locus tag
SPOM_SPBC16D10.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC16D10.02
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Genomic context

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See trm11 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (3588676..3590386)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene NatA N-acetyltransferase complex subunit Neighboring gene protein acl4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit Neighboring gene DNA replication endonuclease-helicase Dna2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tRNA (guanine(10)-N2)-methyltransferase activity ISO
Inferred from Sequence Orthology
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
part_of tRNA (m2G10) methyltransferase complex IC
Inferred by Curator
more info
  

General protein information

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Preferred Names
tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3588676..3590386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022418.3 → NP_596497.2  tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596497.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94636
    Conserved Domains (2) summary
    COG1041
    Location:2 → 418
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
    cl17173
    Location:213 → 329
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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