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[ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540086, updated on 11-Sep-2024

Summary

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Primary source
PomBase:SPBC16H5.12c
Locus tag
SPOM_SPBC16H5.12C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (2274027..2276995)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WDR7-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein arginine N-methyltransferase Skb1 Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase Prp43

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mkt1 is required for RNAi-mediated silencing and establishment of heterochromatin in fission yeast. Taglini F, et al. Nucleic Acids Res, 2020 Feb 20. PMID 31822915, Free PMC Article
  2. TORC2 inhibition of α-arrestin Aly3 mediates cell surface persistence of S. pombe Ght5 glucose transporter in low glucose. Toyoda Y, et al. J Cell Sci, 2021 May 15. PMID 34028542
  3. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article
  4. Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA. Zhang K, et al. Science, 2011 Mar 25. PMID 21436456, Free PMC Article
  5. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables catalytic activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2274027..2276995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021843.3 → NP_595935.2  uncharacterized protein SPOM_SPBC16H5.12C [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595935.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42947
    Conserved Domains (2) summary
    pfam10360
    Location:291 → 379
    DUF2433; Protein of unknown function (DUF2433)
    pfam14962
    Location:408 → 551
    AIF-MLS; Mitochondria Localization Sequence
Nucleotide Protein
Heading Accession and Version

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