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aromatic aminotransferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540092, updated on 18-Sep-2024

Summary

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Official Full Name
aromatic aminotransferase
Primary source
PomBase:SPBC1773.13
Locus tag
SPOM_SPBC1773.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (310437..312518)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene phospholipid-translocating ATPase complex Lem3 family subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene argininosuccinate lyase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 2-aminoadipate transaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables L-phenylalanine-2-oxoglutarate transaminase activity IEA
Inferred from Electronic Annotation
more info
  
enables aromatic-amino-acid transaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in aromatic amino acid family catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in lysine biosynthetic process via aminoadipic acid IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tyrosine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
aromatic aminotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    310437..312518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021035.3 → NP_595128.1  aromatic aminotransferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595128.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94570
    Conserved Domains (2) summary
    cd00609
    Location:98 → 463
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    pfam00155
    Location:91 → 463
    Aminotran_1_2; Aminotransferase class I and II
Nucleotide Protein
Heading Accession and Version

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