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npa3 GTPase npa3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540123, updated on 18-Sep-2024

Summary

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Official Symbol
npa3
Official Full Name
GTPase npa3
Primary source
PomBase:SPBC119.15
Locus tag
SPOM_SPBC119.15
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See npa3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (747807..749216)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene uncharacterized protein Neighboring gene DNA repair and recombination protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene metalloendopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP hydrolysis activity ISO
Inferred from Sequence Orthology
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in RNA polymerase II core complex assembly ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
GTPase npa3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    747807..749216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021204.3 → NP_595297.1  GTPase npa3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595297.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42906
    Conserved Domains (2) summary
    COG1100
    Location:6 → 209
    Gem1; GTPase SAR1 family domain [General function prediction only]
    pfam03029
    Location:13 → 262
    ATP_bind_1; Conserved hypothetical ATP binding protein
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials