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kae1 EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540141, updated on 22-Jun-2024

Summary

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Gene symbol
kae1
Gene description
EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit
Locus tag
SPOM_SPBC16D10.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
pgp2
Old locus tag
SPBC16D10.03
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Genomic context

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See kae1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (3590963..3592684)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA replication endonuclease-helicase Dna2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Negative Regulation of the Mis17-Mis6 Centromere Complex by mRNA Decay Pathway and EKC/KEOPS Complex in Schizosaccharomyces pombe. Xu X, et al. G3 (Bethesda), 2019 Jun 5. PMID 30967422, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables N(6)-L-threonylcarbamoyladenine synthase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in tRNA threonylcarbamoyladenosine modification ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of EKC/KEOPS complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3590963..3592684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022419.3 → NP_596498.1  EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596498.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94637
    Conserved Domains (2) summary
    PTZ00340
    Location:5 → 346
    PTZ00340; O-sialoglycoprotein endopeptidase-like protein; Provisional
    cl22532
    Location:8 → 116
    Carbam_trans_N; Carbamoyltransferase N-terminus
Nucleotide Protein
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Gene LinkOut

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