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sbp1 Ran GTPase-binding protein Sbp1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540142, updated on 22-Jun-2024

Summary

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Gene symbol
sbp1
Gene description
Ran GTPase-binding protein Sbp1
Locus tag
SPOM_SPBC1773.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
yrb1
Old locus tag
SPBC1773.07c
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Genomic context

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See sbp1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (296047..297170, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene alcohol dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alpha-1,2-mannosyltransferase Omh4 Neighboring gene ncRNA Neighboring gene protein mug184

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolated mammalian and Schizosaccharomyces pombe ran-binding domains rescue S. pombe sbp1 (RanBP1) genomic mutants. Novoa I, et al. Mol Biol Cell, 1999 Jul. PMID 10397757, Free PMC Article
  2. The identification of cDNAs that affect the mitosis-to-interphase transition in Schizosaccharomyces pombe, including sbp1, which encodes a spi1p-GTP-binding protein. He X, et al. Genetics, 1998 Feb. PMID 9504913, Free PMC Article
  3. The fission yeast ran GTPase is required for microtubule integrity. Fleig U, et al. J Cell Biol, 2000 Nov 27. PMID 11086011, Free PMC Article
  4. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding TAS
Traceable Author Statement
more info
 PubMed 
contributes_to GTPase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to GTPase activator activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus ISO
Inferred from Sequence Orthology
more info
  
involved_in Ran protein signal transduction IC
Inferred by Curator
more info
 PubMed 
involved_in protein import into nucleus ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ran GTPase-binding protein Sbp1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    296047..297170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021029.3 → NP_595122.1  Ran GTPase-binding protein Sbp1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595122.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42635, Q09717
    Conserved Domains (2) summary
    COG5171
    Location:1 → 215
    YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
    cd13179
    Location:72 → 206
    RanBD_RanBP1; Ran-binding domain
Nucleotide Protein
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