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SPOM_SPBC1652.02 APC amino acid transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540163, updated on 22-Jun-2024

Summary

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Gene symbol
SPOM_SPBC1652.02
Gene description
APC amino acid transporter
Locus tag
SPOM_SPBC1652.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC1652.02
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Genomic context

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See SPOM_SPBC1652.02 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (4256050..4259457)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA-binding transcription factor Stb3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene NuA4 histone acetyltransferase complex subunit Eaf7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Polycystic kidney disease channel and synaptotagmin homologues play roles in schizosaccharomyces pombe cell wall synthesis/repair and membrane protein trafficking. Aydar E, et al. J Membr Biol, 2009 Jun. PMID 19543678
  2. Endocytosis is essential for dynamic translocation of a syntaxin 1 orthologue during fission yeast meiosis. Kashiwazaki J, et al. Mol Biol Cell, 2011 Oct. PMID 21832151, Free PMC Article
  3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables mechanosensitive monoatomic cation channel activity EXP
Inferred from Experiment
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum HDA PubMed 
is_active_in fungal-type vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane EXP
Inferred from Experiment
more info
 PubMed 

General protein information

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Preferred Names
APC amino acid transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4256050..4259457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023790.4 → NP_596769.2  APC amino acid transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596769.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q92367, Q9P7A9, Q9UTT7
    Conserved Domains (1) summary
    COG0833
    Location:31 → 542
    LysP; Amino acid permease [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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