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tho4 THO complex subunit [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540184, updated on 18-Sep-2024

Summary

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Official Symbol
tho4
Official Full Name
THO complex subunit
Primary source
PomBase:SPBC106.12c
Locus tag
SPOM_SPBC106.12C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tho4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (400954..402365, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase catalytic subunit Pka1 Neighboring gene ncRNA Neighboring gene 1-alkyl-2-acetylglycerophosphocholine esterase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ubiquitin ligase complex subunit Neighboring gene SDA1 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Red5 and three nuclear pore components are essential for efficient suppression of specific mRNAs during vegetative growth of fission yeast. Sugiyama T, et al. Nucleic Acids Res, 2013 Jul. PMID 23658229, Free PMC Article
  2. Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA. Zhang K, et al. Science, 2011 Mar 25. PMID 21436456, Free PMC Article
  3. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of THO complex part of transcription export complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleolus HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
THO complex subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    400954..402365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021070.3 → NP_595161.1  THO complex subunit [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595161.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9URV0
    Conserved Domains (2) summary
    COG0724
    Location:1 → 229
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12418
    Location:87 → 158
    RRM_Aly_REF_like; RNA recognition motif in the Aly/REF family
Nucleotide Protein
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