U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ptr2 PTR family peptide transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540201, updated on 22-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
ptr2
Gene description
PTR family peptide transporter
Locus tag
SPOM_SPBC13A2.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPBC13A2.04c
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ptr2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3405575..3408359, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene nucleoporin, WD repeat Nup82 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphatidate cytidylyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Fbl-like pantothenate kinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Ubiquitin ligase Ubr11 is essential for oligopeptide utilization in the fission yeast Schizosaccharomyces pombe. Kitamura K, et al. Eukaryot Cell, 2012 Mar. PMID 22226946, Free PMC Article
  2. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
  3. Nucleocytoplasmic transport in the midzone membrane domain controls yeast mitotic spindle disassembly. Lucena R, et al. J Cell Biol, 2015 May 11. PMID 25963819, Free PMC Article
  4. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  5. A genetic screen to discover pathways affecting cohesin function in Schizosaccharomyces pombe identifies chromatin effectors. Chen Z, et al. G3 (Bethesda), 2012 Oct. PMID 23050226, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dipeptide transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables tripeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in dipeptide import across plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in dipeptide import across plasma membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of TORC1 signaling EXP
Inferred from Experiment
more info
 PubMed 
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in tripeptide import across plasma membrane ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cell division site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in fungal-type vacuole HDA PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane of cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in vacuolar membrane EXP
Inferred from Experiment
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
PTR family peptide transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3405575..3408359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022336.3 → NP_596417.1  PTR family peptide transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596417.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P46031, Q9P380, Q9UU13
    Conserved Domains (2) summary
    COG3104
    Location:63 → 586
    PTR2; Dipeptide/tripeptide permease [Amino acid transport and metabolism]
    pfam00854
    Location:158 → 542
    PTR2; POT family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous