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tuf1 translation elongation factor EF-Tu Tuf1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540210, updated on 18-Sep-2024

Summary

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Official Symbol
tuf1
Official Full Name
translation elongation factor EF-Tu Tuf1
Primary source
PomBase:SPBC9B6.04c
Locus tag
SPOM_SPBC9B6.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tuf1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (1819756..1821429, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene retrotransposable element/transposon Tf2-type Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene zf-FYVE type zinc finger protein and glutamine sensor Pib2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U6 snRNP-associated protein Lsm3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mitochondrial translation: elongation factor tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast. Chiron S, et al. Genetics, 2005 Apr. PMID 15695360, Free PMC Article
  2. The SH3 domains of two PCH family members cooperate in assembly of the Schizosaccharomyces pombe contractile ring. Roberts-Galbraith RH, et al. J Cell Biol, 2009 Jan 12. PMID 19139265, Free PMC Article
  3. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  4. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables GTPase activity ISO
Inferred from Sequence Orthology
more info
  
enables tRNA binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables translation elongation factor activity EXP
Inferred from Experiment
more info
 PubMed 
enables translation elongation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation EXP
Inferred from Experiment
more info
 PubMed 
involved_in mitochondrial translational elongation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial matrix ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
translation elongation factor EF-Tu Tuf1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1819756..1821429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021646.3 → NP_595746.1  translation elongation factor EF-Tu Tuf1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595746.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y700
    Conserved Domains (4) summary
    cd01884
    Location:52 → 245
    EF_Tu; Elongation Factor Tu (EF-Tu) GTP-binding proteins
    PRK00049
    Location:42 → 439
    PRK00049; elongation factor Tu; Reviewed
    cd03697
    Location:253 → 339
    EFTU_II; Domain II of elongation factor Tu
    cd03707
    Location:343 → 434
    EFTU_III; Domain III of Elongation Factor (EF) Tu
Nucleotide Protein
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