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bmc1 Bin3 family regulator [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540331, updated on 18-Sep-2024

Summary

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Official Symbol
bmc1
Official Full Name
Bin3 family regulator
Primary source
PomBase:SPBC2A9.10
Locus tag
SPOM_SPBC2A9.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
bin3
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Genomic context

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See bmc1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (2964103..2965576)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene SNARE protein Sec22 Neighboring gene ncRNA Neighboring gene phosducin family protein Neighboring gene ncRNA Neighboring gene nuclear export factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene origin recognition complex subunit Orc6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The fission yeast methyl phosphate capping enzyme Bmc1 guides 2'-O-methylation of the U6 snRNA. Porat J, et al. Nucleic Acids Res, 2023 Sep 8. PMID 37403782, Free PMC Article
  2. The methyl phosphate capping enzyme Bmc1/Bin3 is a stable component of the fission yeast telomerase holoenzyme. Porat J, et al. Nat Commun, 2022 Mar 11. PMID 35277511, Free PMC Article
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables O-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA 5'-gamma-phosphate methyltransferase activity EXP
Inferred from Experiment
more info
 PubMed 
enables RNA methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables snRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables snoRNA binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA modification IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in snRNA processing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in telomere maintenance IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of sno(s)RNA-containing ribonucleoprotein complex EXP
Inferred from Experiment
more info
 PubMed 
part_of telomerase holoenzyme complex EXP
Inferred from Experiment
more info
 PubMed 

General protein information

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Preferred Names
Bin3 family regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2964103..2965576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022139.3 → NP_596220.1  Bin3 family regulator [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596220.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7L2
    Conserved Domains (2) summary
    pfam06859
    Location:147 → 256
    Bin3; Bicoid-interacting protein 3 (Bin3)
    pfam12847
    Location:36 → 189
    Methyltransf_18; Methyltransferase domain
Nucleotide Protein
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